员工：

邓立宗博士、副研究员

丁啸博士、副研究员

孟静博士、博士后

杨涛硕士、研究实习员

程瑶硕士、研究实习员

巩思嘉硕士、科研助理

学生：

苏明明、博士生

陈禄明、博士生

王江远、博士生

盛婕、直博生

张旭、转博生

李仕成、博士生

秦璐瑶、直博生

齐一凡、直博生

张丽、直博生

李永杰、联培硕士生

谭凯、联培硕士生

张洁、联培硕士生

蒋太交教授先后承担了包括国家“973”项目、自然科学基金等国家级、省部级科研项目10余项，并取得了诸多代表性的研究成果，包括基因共变化网络新方法、流感疫苗株推荐新方法、H7N9禽流感病毒溯源、埃博拉病毒危害性预测等。相关研究成果发表于Cell Stem Cell, Cell host & microbe, Genome Research, CellResearch, Nature Communications, Bioinformatics, Plos Computational Biology,Brief Bioinform, PNAS等国际知名刊物上。

1. 中国医学科学院重大协同创新项目  项目负责人  在研

项目名称：系统医学技术研究与应用

编号：2016-I2M-1-005

起止时间：2016-2020

总金额：15,100,000

2. 国家自然科学基金 项目负责人  在研

项目名称：流感病毒抗原变异与耐药性的关联机制研究

编号：31671371

起止时间：2017-2020

总金额： 620,000元

3. 国家重点基础研究发展计划  子课题负责人 已结题

项目名称：流感等重要病毒与宿主动态互作多维分子网络模建

编号：2015CB910501

起止时间：2015-2019

总金额：780,000

4. 国家自然科学基金  项目负责人  已结题

项目名称：发展整合的方法系统地分析流感病毒基因复制的结构基础和分子机理

编号：31371338

起止时间：2014-2017

总金额：600,000

5. 国家国际科技合作专项项目 课题骨干  已结题

项目名称：蛋白质组信息学关键技术及分析系统研发

编号：2014DF30010

起止时间：2014-2017

总金额：2,200,000

6. 国家科技重大专项 课题骨干  已结题

项目名称：H7N9等新型流感病毒病跨种传播机制研究

编号：2014ZX10004002-001

起止时间：2014-2016

总金额：1,660,000

7. 国家科技重大专项   子课题负责人  已结题

项目名称：基于生物信息学与结构生物学的病原体生物标志物的优化研究平台

编号：2013ZX10004611-002

起止时间：2013-2015

总金额：1,590,000

8. 中科院重点部署项目 项目负责人  已结题

项目名称：人感染H7N9禽流感病毒溯源与分子进化研究

编号：KJZD-EW-L09-1

起止时间：2013-2014

总金额：500,000

9. 国家杰出青年科学基金 项目负责人  已结题

项目名称：发展计算与系统生物学方法研究流感传播传染规律及其分子机理

编号：31125016

起止时间：2012-2015

总金额：2,400,000

10. 973计划  参与人员  已结题

项目编号：蛋白质相互作用网络形成的结构基础与动力学分析

编号：2009CB918503

起止时间：2009-2013

总金额：2,390,000

代表性成果：

1. 率先完成2019年新冠病毒基因组功能注释（Cell Host Microbe. 2020 Mar 11 ;27(3):325-328.）

2. 发明了埃博拉病毒早期危害性预测技术（CellResearch. 2015 Jun; 25(6):753-6.）

3. 成功溯源了2013年华东地区H7N9病毒（Cell Host & Microbe. 2013 Oct 16; 14(4):446-52.）

4. 发明了流感疫苗株推荐新方法（NatureCommunications, 28 Feb 2012; 3:709.）

发表论文：

1)       Qiu-hua Gu#, Megan Huynh#,Yue Shi#, Xiao-yuJia, Jie-jian Luo,Tai-jiao Jiang,Zhao Cui*, Joshua D. Ooi, A. Richard Kitching, Ming-hui Zhao. ExperimentalAntiglomerular Basement Membrane GN Induced by a Peptide from Actinomyces. J AmSoc Nephrol. 2020 Jun;31(6):1282-1295.

2)       Jun Zhao, Mao Tian, Shu Zhang, AlirezaDelfarah, Ruoyun Gao, Youliang Rao, Ali Can Savas, Anjie Lu, Larissa Bubb, XiaoLei, Rosa Moshirian, Wenjie Zhu, Cheng Peng, Taijiao Jiang, Lin Chen,Nicholas A Graham, Pinghui Feng*. Deamidation Shunts RelA From MediatingInflammation to Aerobic Glycolysis. Cell Metab. 2020 May5;31(5):937-955.

3)       Zheng Zhang# , Fen Yu# ,Yuanqiang Zou, Ye Qiu, Aiping Wu, Taijiao Jiang, Yousong Peng*. Phageprotein receptors have multiple interaction partners and high expressions.Bioinformatics. 2020 May 1;36(10):2975-2979.

4)       Congyu Lu# , Zena Cai# ,Yuanqiang Zou, Zheng Zhang,Wenjun Chen, Lizong Deng, Xiangjun Du, Aiping Wu,Lei Yang, Dayan Wang, Yuelong Shu, Taijiao Jiang* and Yousong Peng*.FluPhenotype - a one-stop platform for early warnings of the influenza A virus.Bioinformatics. 2020 May 1;36(10):3251-3253.

5)       Zena Cai# , Yunshi Fan#, Zheng Zhang, Congyu Lu, Zhaozhong Zhu, Taijiao Jiang,Tongling Shan, Yousong Peng*. VirusCircBase: A Database of Virus Circular RNAs.Brief Bioinform. 2020 Apr 29;bbaa052.

6)       Guogang Xu# , Yongshi Yang#, Yingzhen Du# ,Fujun Peng# , PengHu, Runsheng Wang, Ming Yin, Tianzhi Li, Lei Tu*, Jinlyu Sun*, Taijiao Jiang*,Christopher Chang*. Clinical Pathway for Early Diagnosis of COVID-19: UpdatesFrom Experience to Evidence-Based Practice. Clin Rev Allergy Immunol.2020 Apr 24;1-12.

7)       Fujun Peng# , Lei Tu# ,Yongshi Yang# , PengHu# , Runsheng Wang,Qinyong Hu, Feng Cao, Taijiao Jiang*, Jinlyu Sun*, Guogang Xu*,Christopher Chang*. Management and Treatment of COVID-19: The ChineseExperience. Can J Cardiol. 2020 Apr 17;36(6):915-930.

8)       Zhaozhong Zhu# , Yunshi Fan#, Yang Liu, Taijiao Jiang, Yang Cao*, Yousong Peng*.Prediction of Antiviral Drugs Against African Swine Fever Viruses Based onProtein-Protein Interaction Analysis. PeerJ. 2020 Apr 1;8:e8855.

9)       Aiping Wu# , Yousong Peng#, Baoying Huang# ,Xiao Ding# , XianyueWang, Peihua Niu, Jing Meng, Zhaozhong Zhu, Zheng Zhang, Jiangyuan Wang, JieSheng, Lijun Quan, Zanxian Xia, Wenjie Tan*, Genhong Cheng* and TaijiaoJiang*. Genome Composition and Divergence of the Novel Coronavirus(2019-nCoV) Originating in China. Cell Host Microbe. 2020 Mar 11; 27(3):325-328.

10)    Ao Sun# , Ke Xu# ,Haifeng Liu, Hua Li, Yaohuang Shi, Xiaoyan Zhu, Tao Liang, Xinyue Li, XianxiaCao, Yanhong Ji, Taijiao Jiang, Chenqi Xu Xiaolong Liu*. The evolutionof zebrafish RAG2 protein is required for adapting to the elevated bodytemperature of the higher endothermic vertebrates. Sci Rep. 2020Mar 5;10(1):4126.

11)    Yongshi Yang# , Fujun Peng#, Runsheng Wang# ,Kai Guan, Taijiao Jiang*, Guogang Xu*, Jinlyu Sun*,Christopher Chang*. The deadly coronaviruses: The 2003 SARS pandemicand the 2020 novel coronavirus epidemic in China. J Autoimmun.2020 May;109:102434.

12)    Yan Wang# , Lina Zhu# ,Xiuwei Ma# , FangYang, Xilin Xu, Yao Yang, Xiao Yang, Wei Peng, Wanqiao Zhang, Jinyu Liang,Weidong Zhu, Taijiao Jiang, Xinlei Zhang, Zhichun Feng*. Gene-FocusedNetworks Underlying Phenotypic Convergence in a Systematically PhenotypedCohort With Heterogeneous Intellectual Disability. Front BioengBiotechnol. 2020 Feb 7;8:45.

13)    Kun Jiang# , TaoYang# ,Chunyan Wu# , LumingChen, Longfei Mao, Yongyou Wu*, Lizong Deng*, Taijiao Jiang*. LATTE: Aknowledge-based method to normalize various expressions of laboratory testresults in free text of Chinese electronic health records. J BiomedInform. 2020 Feb;102:103372.

14)    Qiuhua Gu# , Megan Huynh#, Yue Shi# ,Xiaoyu Jia, Jiejian Luo, Taijiao Jiang, Zhao Cui*, Joshua D Ooi, ARichard Kitching, Minghui Zhao. Experimental Antiglomerular Basement MembraneGN Induced by a Peptide From Actinomyces. J Am Soc Nephrol. 2020Jun;31(6):1282-1295.

15)    Xiao Ding#  , Xuye Yuan,Longfei Mao, Aiping Wu* and Taijiao Jiang*. FluReassort: a database forthe study of genomic reassortments among influenza viruses. BriefBioinform. 2019 Nov 27 pii: bbz128.

16)    Shengguang Li# , Fujun Peng#, Yichong Ning, Peng Jiang, Jian Peng,  Xiaofeng Ding, Jian Zhang*, Taijiao Jiang*,and Shuanglin Xiang*. SNHG16 as the miRNA let‐7b‐5p sponge facilitates the G2/Mand epithelial‐mesenchymal transition by regulating CDC25B and HMGA2 expressionin hepatocellular carcinoma. J Cell Biochem. 2019 Nov 7.

17)    LizhiLeng# , JiyaSun# ,JinrongHuang# ,FeiGong, LingYang, ShuopingZhang, XuyeYuan, FangFang, XunXu, YonglunLuo,LarsBolund, Brock A Peters, GuangxiuLu, TaijiaoJiang*,FengpingXu*, GeLin*. Single-Cell Transcriptome Analysis of Uniparental EmbryosReveals Parent-of-Origin Effects on Human Preimplantation Development.Cell Stem Cell. 2019 Nov 7;25(5):697-712.

18)    Jiya Sun# , Jingfeng Wang# , Xuye Yuan, Xiangwei Wu, Tianqi Sui,1,2 Aiping Wu*,Genhong Cheng*, and Taijiao Jiang*. Regulation of Early Host ImmuneResponses Shapes the Pathogenicity of Avian Influenza A Virus. FrontMicrobiol. 2019 Sep 11;10:2007.

19)    Zhaozhong Zhu# , Chao-Ting Xiao# , Yunshi Fan, Zena Cai, Congyu Lu, Gaihua Zhang, TaijiaoJiang, Yongjun Tan, YousongPeng*. Homologous recombination shapes thegenetic diversity of African swine fever viruses. Vet Microbiol.2019 Sep;236:108380.

20)    Zheng Zhang, Zena Ca, Zhiying Tan, CongyuLu, Taijiao Jiang, Gaihua Zhang, Yousong Peng*. Rapid identification ofhuman-infecting viruses. Transbound Emerg Dis. 2019 Aug 2.

21)    Ai Lu, Cyrollah Disoma, Yuzheng Zhou,Zongpeng Chen, Liming Zhang, Yilun Shen, Mei Zhou, Ashuai Du, Rong Zheng, SijiaLi, Moyed Alsaadawe, Shiqin Li, Jiada Li, Weilan Wang, Taijiao Jiang,Jian Peng*, Zanxian Xia*.Protein interactome of the deamidasephosphoribosylformylglycinamidine synthetase (PFAS) by LC-MS/MS. BiochemBiophys Res Commun. 2019 Jun 4;513(3):746-752.

22)    Lijun Quan# , Chengyang Ji, Xiao Ding, Yousong Peng, Mi Liu, JiyaSun,  Taijiao Jiang, Aiping Wu*.Cluster-transition determining sites underlying the antigenic evolution ofseasonal influenza viruses. Molecular Biology and Evolution. 2019Jun 1;36(6):1172-1186.

23)    ZichaoGuo#, Hong Liu*, Haomiao Ni, Xiangdong Wang, Mingming Su, Wei Guo, KuansongWang*, Taijiao Jiang & YueliangQian*. A Fast and Refined Cancer Regions Segmentation Framework in Whole-slideBreast Pathological Images. Sci Rep. 2019 Jan 29;9(1):882.

24)    CongyuLu#, Mi Liu#, Aiping Wu, Yuelong Shu, Yousong Peng* &Taijiao Jiang*  PREDAV-H1: a user-friendly web server forpredicting antigenic variants of influenza H1N1 viruses. Sci China Life Sci. 2018Oct 26.

25)    Zheng Zhang#,Zhaozhong Zhu#, Wenjun Chen, Zena Cai, Beibei Xu, Zhiying Tan,Aiping Wu, Xingyi Ge, Xinhong Guo, Zhongyang Tan, Zanxian Xia, Haizhen Zhu*, Taijiao Jiang*, Yousong Peng*. Cellmembrane proteins with high N-glycosylation, high expression, and multipleinteraction partners are preferred by mammalian viruses as receptors. Bioinformatics.2018 Aug 9.

26)    Min Zhao#,Kefang Liu#, Jiejian Luo#, Shuguang Tan, Chuansong Quan,Shuijun Zhang, Yan Chai, Jianxun Qi, Yan Li, Yuhai Bi, Haixia Xiao, Gary Wong,Jianfang Zhou, Taijiao Jiang, WenjunLiu, Hongjie Yu, Jinghua Yan, Yingxia Liu, Yuelong Shu, Guizhen Wu, Aiping Wu*,George F. Gao*, William J. Liu*. Heterosubtypic Protections againstHuman-Infecting Avian Influenza Viruses Correlate to Biased Cross-T-Cell Responses.MBio.2018 Aug 7;9(4). pii: e01408-18. doi: 10.1128/mBio.01408-18. 

27)    HaiqinJiang#, Jiya Sun#, Yanqing Chen#, ZhimingChen, Le Wang, Wei Gao, Ying Shi, Wenyue Zhang, Youming Mei, SantoshChokkakula, Varalakshmi Vissa, TaijiaoJiang*, Aiping Wu* and Hongsheng Wang*. Landscape of the genome and hostcell response of Mycobacterium shigaense reveals pathogenic features. EmergMicrobes Infect. 2018 Jun 22;7(1):112. doi: 10.1038/s41426-018-0116-z. 

28)    YousongPeng#, Xiaodan Li#, Hongbo Zhou, Aiping Wu, Libo Dong, YeZhang, Rongbao Gao, Hong Bo, Lei Yang, Dayan Wang, Xian Lin, Meilin Jin*,Yuelong Shu* & Taijiao Jiang*. Corrigendum:Continual Antigenic Diversification in China Leads to Global AntigenicComplexity of Avian Influenza H5N1 Viruses. Sci Rep. 2018 May31;8:46994. 

29)    ZhaozhongZhu#, Zheng Zhang#, Wenjun Chen, Zena Cai, Xingyi Ge, HaizhenZhu, Taijiao Jiang, Wenjie Tan*, YousongPeng*. Predicting the receptor-binding domain usage of the coronavirus based onkmer frequency on spike protein. Infection, Genetics and Evolution. Volume61, July 2018, Pages 183-184. 

30)    YatongLi#, Yongna Fan#, Jing Xu, Peng Zhang, Taijiao Jiang, Menghua Dai*, Limin Li*. Genome-wideRNA-Seq Identifies Fas/FasL-mediated Tumoricidal Activity of Embryonic StemCells. Int J Cancer. 2017 Dec 8. doi:10.1002/ijc.31201.

31)    FeiTang, Peng Zhang, Peiying Ye, Christopher A Lazarski, Qi Wu, Ingrid L Bergin,Timothy P Bender, Michael N Hall, Ya Cui, Liguo Zhang, Taijiao Jiang, Yang Liu*, Pan Zheng*. Apopulation of innate myelolymphoblastoid effector cell expanded by inactivationof mTOR complex 1 in mice. Elife. 2017 Dec 5;6. pii: e32497.  

32)    JiejianLuo#, Lizong Deng#, Xiao Ding, Lijun Quan, Aiping Wu* andTaijiao Jiang*. Hydrogen Bond Variations of Influenza AViruses During Adaptation in Human. Sci Rep. 2017 Oct30;7(1):14295.

33)    XiaoDing#, Jiejian Luo, Lijun Quan, Aiping Wu*, Taijiao Jiang*. Evolutionary genotypes ofinfluenza A (H7N9) viruses over five epidemic waves in China. InfectGenet Evol. 2017 Sep 22; 55:269-276.

34)    Zhe Guan#,Tiantian Cai#, Zhongmin Liu, Yunfeng Dou, Xuesong Hu, Peng Zhang,Xin Sun, Hongwei Li, Yao Kuang, Qiran Zhai, Hao Ruan, Xuanxuan Li, Zeyang Li,Qihui Zhu, Jingeng Mai, Qining Wang, Luhua Lai, Jianguo Ji, Haiguang Liu, BinXia, Taijiao Jiang, Shu-Jin Luo,Hong-Wei Wang, Can Xie. Origin of the Reflectin Geneand Hierarchical Assembly of Its Protein. Curr Biol. 2017Sep 25;27(18):2833-2842.e6.

35)    BeibeiXu, Zhiying Tan, Kenli Li, Taijiao Jiang*and Yousong Peng*. Predictingthe host of influenza viruses based on the word vector. PeerJ. 2017 Jul 18; 5: e3579.

36)    Jian-nanLi, Xiaoyu Jia, Yongqiang Wang, Can Xie, TaijiaoJiang, Zhao Cui*, Ming-hui Zhao. Plasmafrom patients with anti-glomerular basement membrane disease could recognize microbialpeptides. PLoS ONE. 2017 Apr14;12(4):e0174553. 

37)    ZiyiChen#, Anfei Huang#, Jiya Sun, Taijiao Jiang, Xiao-Feng Qin*, and Aiping Wu*. Inferenceof immune cell composition on the expression profiles of mouse tissue. Sci Rep. 2017 Mar 24;7:45416.

38)    LulanWang#, Su-Yang Liu#, Hsiang-Wen Chen#, Juan Xu#,Maxime Chapon, Tao Zhang, Fan Zhou, Yao E. Wang, Natalie Quanquin, Guiqin Wang,Xiaoli Tian, Zhanlong He, Longding Liu, Wenhai Yu, David Jesse Sanchez, YuyingLiang, Taijiao Jiang, Robert Modlin,Barry R. Bloom, Qihan Li, Jane C. Deng, Paul Zhou, F. Xiao-Feng Qin*, GenhongCheng*. Generation of a LiveAttenuated Influenza Vaccine that Elicits Broad Protection in Mice and Ferrets. Cell Host Microbe. 2017 Mar 8; 21(3):334-343.

39)    YousongPeng#, Xiaodan Li#, Hongbo Zhou, Aiping Wu, Libo Dong, YeZhang, Rongbao Gao, Hong Bo, Lei Yang, Dayan Wang, Xian Lin, Meilin Jin*,Yuelong Shu* and Taijiao Jiang*. Continual AntigenicDiversification in China Leads to Global Antigenic Complexity of AvianInfluenza H5N1 Viruses. Sci Rep. 2017Mar 6; 7:43566.

40)    LinaYuan#, Yang Yu#, Yanmin Zhu, Yulai Li, Changqing Li,Rujiao Li, Qin Ma, Gilman Kit-Hang Siu, Jun Yu, Taijiao Jiang, Jingfa Xiao*, and Yu Kang*. GAAP:Genome-organization-framework-Assisted Assembly Pipeline for prokaryoticgenomes. BMC Genomics. 2017 Jan 25; 18(Suppl 1):952. 

41)    YuanqiangZou, Zhiqiang Wu, Lizong Deng, Aiping Wu, Fan Wu, Kenli Li, Taijiao Jiang* and Yousong Peng*. cooccurNet:an R package for co-occurrence network construction and analysis. Bioinformatics. 2017 Jun 15;33(12):1881-1882.

42)    YousongPeng#, Dayan Wang, Jianhong Wang, Kenli Li, Zhongyang Tan, YuelongShu, and Taijiao Jiang*. Auniversal computational model for predicting antigenic variants of influenza Avirus based on conserved antigenic structures. Sci Rep. 2017 Feb 6; 7:42051. 

43)    ChunfengLi#, Zining Wang#, Yang Cao#, Lulan Wang,Jingyun Jie, Zhigao Chen, Tao Deng, TaijiaoJiang, Genhong Cheng* and F. Xiao-Feng Qin*. Screeningfor Novel Small-Molecule Inhibitors Targeting the Assembly of Influenza VirusPolymerase Complex by a Bimolecular Luminescence Complementation-Based ReporterSystem. J Virol. 2017 Feb14; 91(5). pii:e02282-16. 

44)    WentaoDai#, Aiping Wu#, Liangxiao Ma, Yi-Xue Li, Taijiao Jiang*, and Yuan-Yuan Li*. A novel index ofprotein-protein interface propensity improves interface residue recognition.BMCSyst Biol. 2016 Dec 23; 10(Suppl 4):112.

45)    YousongPeng, Dayan Wang, Yuelong Shu andTaijiao Jiang*. Largediscrepancy between the two-way rNHT distances in hemagglutinin - inhibitionassay. Virol Sin. 2016 Oct; 31(5):441-443.

46)     Yousong Peng#, Lei Yang#, Honglei Li, Yuanqiang Zou, Lizong Deng, Aiping Wu,Xiangjun Du, Dayan Wang, Yuelong Shu* and Taijiao Jiang*. PREDAC-H3:a user-friendly platform for antigenic surveillance of human influenza a (H3N2)virus based on hemagglutinin sequences. Bioinformatics. 2016 Aug 15; 32(16):2526-7.

47)     Yongqiang Wang#, Jiuxin Qu#, Qi Ba#, Jiuhong Dong, Liang Zhang, Hong Zhang, Aiping Wu,Dayan Wang, Zanxian Xia, Daxin Peng, Yuelong Shu, Bin Cao*, Taijiao Jiang*.Detection and typing of human-infecting influenza viruses in China by using amultiplex DNA biochip assay. JVirol Methods. 2016 Aug; 234:178-85.

48)     Lulan Wang#, Stephanie G. Valderramos#, Aiping Wu, Songying Ouyang, Chunfeng Li, PatriciaBrasil, Myrna Bonaldo, Thomas Coates, Karin Nielsen-Saines, Taijiao Jiang*,Saba Aliyari*, Genhong Cheng*. From Mosquitos to Humans: Genetic Evolution ofZika Virus. Cell Host &Microbe. 2016 May 11; 19(5):561-5. 

49)     Chi-Shan Li#, Fei Tang#, Peng Zhang, Taijiao Jiang, Thomas LSaunders, Pan Zheng* and Yang Liu*. Trap1a is anX-linked and cell-intrinsic regulator of thymocyte development. Cell Mol Immunol. 2016 Apr 11. doi:10.1038/cmi.2015.108. 

50)     Dejiu Zhang#, Kaige Yan#, Guangqiao Liu, Guangtao Song, Jiejian Luo, Yi Shi,Erchao Cheng, Shan Wu, Taijiao Jiang, Jizhong Lou, Ning Gao* & YanQin*. EF4 disengages the peptidyl-tRNA CCA end and facilitatesback-translocation on the 70S ribosome. Nat Struct Mol Biol, 2016 Feb; 23(2):125-31.

51)     Lulan Wang#, Aiping Wu#, Yao E. Wang#, Natalie Quanquin, Chunfeng Li, Jingfeng Wang,Hsiang-Wen Chen, Suyang Liu, Ping Liu, Hong Zhang, F. Xiao-Feng Qin, TaijiaoJiang*, Genhong Cheng*. Functional Genomics Reveals Linkers Criticalfor Influenza Polymerase. JVirol. 2016 March; 90(6):2938-47.  

52)     Xilin Xu#, Aiping Wu#, Xinlei Zhang,Mingming Su, Taijiao Jiang* & Zhe-Ming Yuan*. MetaDP: a comprehensive web server for diseaseprediction of 16S rRNA metagenomic datasets. Biophys Rep. 2016; 2(5):106-115.

53)     Siying Qin#, Hang Yin#, Celi Yang, Yunfeng Dou, Zhongmin Liu, Peng Zhang,He Yu, Yulong Huang, Jing Feng, Junfeng Hao, Jia Hao, Lizong Deng, Xiyun Yan,Xiaoli Dong, Zhongxian Zhao, Taijiao Jiang, Hong-Wei Wang, Shu-Jin Luo& Can Xie*. A magnetic protein biocompass. Nature Materials, 2016 Feb; 15(2):217-26.

54)     F. Xiao-Feng Qin*, Cheng-Yu Jiang, Taijiao Jiangand Genhong Cheng*. New targets for controlling Ebola virusdisease. Natl Sci Rev.2015 Sep; 2(3):266-267.

55)     Mi Liu#, Xiang Zhao#, Sha Hua#, Xiangjun Du, Yousong Peng, Xiyan Li, Yu Lan, DayanWang, Aiping Wu*, Yuelong Shu*, Taijiao Jiang*. Antigenic Patternsand Evolution of the Human Influenza A (H1N1) Virus. Scientific Reports. 2015 Sep 28; 5:14171. 

56)     Sha Hua#, Xiyan Li#, Mi Liu#, Yanhui Cheng#, Yousong Peng,Weijuan Huang, Minju Tan, Hejiang Wei, Junfeng Guo, Dayan Wang, Aiping Wu*,Yuelong Shu*, Taijiao Jiang*. Antigenic variationof the human influenza A (H3N2) virus during the 2014-2015 winter season. Sci China Life Sci, 2015 Sep; 58(9):882-8.

57)     Mi Liu#, Tingrui Song#, Sha Hua, Aiping Wu* & Taijiao Jiang*. Computationalanalysis of antigenic epitopes of avian influenza A (H7N9) viruses. Sci China Life Sci, 2015 Jul; 58(7):687-93.

58)     Junjie Zhang#, Lining Zhu#, Xiaolu Lu, Emily R. Feldman, Lisa R. Keyes, YiWang, Hui Fan, Hao Feng, Zanxian Xia, Jiya Sun, Taijiao Jiang,Shou-jiang Gao, Scott A. Tibbetts, Pinghui Feng*. Recombinant Murine Gamma Herpesvirus 68Carrying KSHV G Protein-Coupled Receptor Induces Angiogenic Lesions in Mice.PLoS Pathog, 2015 Jun 24; 11(6):e1005001.

59)     Lizong Deng#, Mi Liu#, Sha Hua#, Yousong Peng, Aiping Wu, F Xiao-Feng Qin*, GenhongCheng* and Taijiao Jiang*. Network ofco-mutations in Ebola virus genome predicts the disease lethality. Cell Research. 2015 Jun; 25(6):753-6.

60)     Haisheng Yu#, Peng Zhang#, Xiangyun Yin, Zhao Yin, Quanxing Shi, Ya Cui,Guanyuan Liu, Shouli Wang, Pier Paolo Piccaluga, Taijiao Jiang*, LiguoZhang*. Human BDCA2+CD123+CD56+ dendritic cells (DCs) related to blasticplasmacytoid dendritic cell neoplasm represent a unique myeloid DC subset. Protein Cell. 2015 Apr; 6(4):297-306.

61)     Lizhong Wang#*, RunhuaLiu#, Peiying Ye, Chunshu Wong, Guo-Yun Chen, Penghui Zhou, KaoruSakabe, Xincheng Zheng, Wei Wu, Peng Zhang, Taijiao Jiang, Michael F. Bassetti, Sandro Jube, Yi Sun, YanpingZhang, Pan Zheng* & Yang Liu*. IntracellularCD24 disrupts the ARF-NPM interaction and enables mutational and viraloncogene-mediated p53 inactivation. NatureCommunications, 2015Jan 20; 6:5909.

62)     Honglei Li#, Yousong Peng#*, Yuanqiang Zou,Zechi Huang, Aiping Wu, Kenli Li, TaijiaoJiang*. PREDAC-H5: A User-friendly Tool for theAutomated Surveillance of Antigenic Variants for the HPAI H5N1 Virus. Infection,Genetics and Evolution. Infection,Genetics and Evolution. 2014 Dec; 28:62-3.  

63)     Chunfeng Li#, Aiping Wu#, Yousong Peng, Jingfeng Wang, Yang Guo, ZhigaoChen, Hong Zhang, Yongqiang Wang, Jiuhong Dong, Lulan Wang, F. Xiao-Feng Qin,Genhong Cheng*, Tao Deng* & Taijiao Jiang*. Integratingcomputational modeling and functional assays to decipher the structure-functionrelationship of influenza virus PB1 protein. Scientific Reports. 2014 Nov 26; 4:7192.  

64)     Lili Zhao#, Yousong Peng#, Kai Zhou#, Mengmeng Cao, Jingfeng Wang, Xue Wang, TaijiaoJiang, and Tao Deng*. New Insights into the Nonconserved NoncodingRegion of the Subtype-Determinant Hemagglutinin and Neuraminidase Segments ofInfluenza A Viruses. JVirol. 2014 Oct 1; 88(19):11493-503.

65)     Lizong Deng#, Aiping Wu#, Wentao Dai, Tingrui Song, Ya Cui, and TaijiaoJiang*. Exploring protein domain organization byrecognition of secondary structure packing interfaces. Bioinformatics. 2014 Sep 1; 30(17):2440-6.

66)     Cai Qi#, Hong Zhang#, Li Liu, YinKe Yang, TengFei Kang, WenXin Hao, GangJin* and Taijiao Jiang*. Analysis of interactions between SNARE proteinsusing imaging ellipsometer coupled with microfluidic array. Scientific Reports. 2014 Jun 18; 4:5341. 

67)     Lizong Deng, Xiaoxi Dong, Aiping Wu, Tingrui Song, TaijiaoJiang*. Coevolution signals capture the specificpacking of secondary structures in protein architecture. Protein Cell. 2014 Jun; 5(6):480-3.  

68)     Qiqun Zeng#, Peng Zhang#, Zhenzhen Wu#, Peng Xue, Di Lua, Zhongde Ye, Xinlei Zhang, ZechiHuang, Jing Feng, Lina Song, Dongling Yang, Taijiao Jiang*, Xiyun Yan*. QuantitativeProteomics Reveals ER-α Involvement in CD146-induced Epithelial-MesenchymalTransition in Breast Cancer Cells. J Proteomics. 2014 May 30; 103:153-69. 

69)     Wentao Dai#, Tingrui Song#, Xuan Wang, Xiaoyang Jin, Lizong Deng, Aiping Wu*, TaijiaoJiang*. Improvement in low-homology template-basedmodeling by employing a model evaluation method with focus on topology. PLoS ONE. 2014 Feb 26; 9(2):e89935. 

70)     Zhichao Miao, Yang Cao, Taijiao Jiang*. Modelingof protein side-chain conformations with RASP. MethodsMol Biol. 2014; 1137:43-53.

71)     Yousong Peng#, Yuanqiang Zou#, Honglei Li, Kenli Li, Taijiao Jiang*.   Vaccine.2014 Feb 3; 32(6):671-6. 

72)     Aiping Wu#, Chunhu Su#, Dayan Wang#, Yousong Peng#, Mi Liu, Sha Hua, Tianxian Li, George F. Gao, HongTang, Jianzhu Chen, Xiufan Liu, Yuelong Shu, Daxin Peng*, and Taijiao Jiang*. Sequential Reassortments Underlie DiverseInfluenza H7N9 Genotypes in China. Cell Host & Microbe. 2013 Oct 16; 14(4):446-52. 

73)     Xiao Xu, Gui-Xin Dong, Xue-Song Hu, Lin Miao, Xue-LiZhang, De-Lu Zhang, Han-Dong Yang, Tian-You Zhang, Zheng-Ting Zou, Ting-TingZhang, Yan Zhuang,Jong Bhak, Yun Sung Cho, Wen-Tao Dai, Tai-Jiao Jiang, CanXie, Ruiqiang Li*, and Shu-Jin Luo*. Thegenetic basis of white tigers.Curr Biol. 2013 Jun 3; 23(11):1031-5.

74)     Yi Lu, Taijiao Jiang*. Pseudovirus-based neuraminidase inhibitionassays reveal potential H5N1 drug-resistant mutations. Protein Cell. 2013 May; 4(5):356-63.

75)     Chunfeng Li#, Qi Ba#, Aiping Wu, Hong Zhang, Tao Deng*, Taijiao Jiang*.Apeptide derived from the C-terminus of PB1 inhibits influenza virus replicationby interfering with viral polymerase assembly. FEBS J. 2013 Feb; 280(4):1139-49. 

76)     Yongqiang Wang#, Xinlei Zhang#, Hong Zhang#, Yi Lu, Haolong Huang, Xiaoxi Dong, Jinan Chen,Jiuhong Dong, Xiao Yang, Haiying Hang, Taijiao Jiang*. Coiled-coilnetworking shapes cell molecular machinery. Mol Biol Cell. 2012 Oct 1; 23(19):3911-22. 

77)     Alyssa M. Larson, Hongmei Wang, Yang Cao, TaijiaoJiang, Jianzhu Chen, Alexander M. Klibanov*. Conjugating drugcandidates to polymeric chains does not necessarily enhance anti-influenzaactivity. J Pharm Sci.2012 Oct; 101(10):3896-905.

78)    Xiangjun Du#, Libo Dong#, Yu Lan, Yousong Peng, Aiping Wu, Ye Zhang, WeijuanHuang, Dayan Wang, Min Wang, Yuanji Guo, Yuelong Shu* & Taijiao Jiang*.Mappingof H3N2 influenza antigenic evolution in China reveals a strategy for vaccinestrain recommendation. NatureCommunications, 28 Feb 2012; 3:709. 

79)     Zhichao Miao, Yang Cao, Taijiao Jiang*. RASP:Rapid modeling of protein side-chain conformations. Bioinformatics. 2011 Nov 15; 27(22):3117-22. 

80)     Miao Jin, Jinan Chen, Xiao-hong Zhang, Ming Zhang,Hui-ying Li, Wei-xia Cheng, Na Liu, Ming Tan, Taijiao Jiang*, Zhao-JunDuan*. Geneticdiversity of noroviruses in Chinese adults: Potential recombination hotspotsand GII-4/Den Haag-specific mutations at a putative epitope. Infect Genet Evol. 2011 Oct; 11(7):1716-26. 

81)     Liqing Tian, Aiping Wu, Yang Cao, Xiaoxi Dong, YunHu and Taijiao Jiang*. NCACO-score: An effective main-chain dependent scoringfunction for structure modeling. BMC Bioinformatics. 2011 May 26;12:208.

82)     Yang Cao#, Lin Song#, Zhichao Miao, Yun Hu, Liqing Tian, Taijiao Jiang*.Improvedside-chain modeling by coupling clash-detection guided iterative search withrotamer relaxation. Bioinformatics,2011 Jan 6; 27 (6):785-90.

83)     Junping Fan, Jie Heng, Shuyan Dai, Neil Shaw, BeiZhou, Bo Huang, Zheng He, Ya Wang, Taijiao Jiang, Xuemei Li, Zhijie Liu,Xianping Wang*, Xuejun C. Zhang. An efficient strategy for high throughputscreening of recombinant integral membrane protein expression and stability. Protein Expr Purif. 2011 Jul; 78(1):6-13.

84)     Liqing Tian#, Aiping Wu#, Yang Cao, Xiaoxi Dong, Yun Hu, Taijiao Jiang*.NCACO-score:An effective main-chain dependent scoring function for structure modeling. BMC Bioinformatics, 2011 May 26; 12:208.  

85)     Yang Cao#, Xiaoying Koh#, Libo Dong#, Xiangjun Du, Aiping Wu, Xilai Ding, Hongyu Deng,Yuelong Shu*, Jianzhu Chen*, Taijiao Jiang*. RapidEstimation of Binding Activity of Influenza Virus Hemagglutinin to Human andAvian Receptors. PLoS ONE,2011 Apr 13; 6(4): e18664.   

86)     Yun Hu, Xiaoxi Dong, Aiping Wu, Yang Cao, LiqingTian, Taijiao Jiang*  Incorporation ofLocal Structural Preference Potential Improves Fold Recognition. PLoS One. 2011 Feb 18;6(2):e17215.

87)     Gang Jin, Yonghong Meng, Li Liu, Yu Niu, She Chen,Cai Qi, Taijiao Jiang. Development of biosensor based on imagingellipsometry and biomedical applications. Thin Solid Films, 2011 Feb 28; 59(9):2750-7.

88)     Yun Hu#, Xiaoxi Dong#, Aiping Wu, Yang Cao, Liqing Tian, Taijiao Jiang*.Incorporationof Local Structural Preference Potential Improves Fold Recognition. PLoS ONE, 2011 Feb 18; 6(2): e17215.

89)     Hong Zhang, Taijiao Jiang*. Syntheticcircuits, devices and modules. Protein Cell, 2010 Nov; 1(11):974-8.

90)     Aiping Wu#, Yousong Peng#, Xiangjun Du, Yuelong Shu, Taijiao Jiang*. Correlationof Influenza Virus Excess Mortality with Antigenic Variation: Application toRapid Estimation of Influenza Mortality Burden. PLoS Comput Biol, 2010 Aug 12; 6(8):e1000882. 

91)     Yu Lan, Ye Zhang, Libo Dong, Dayan Wang, WeijuanHuang, Li Xin, Limei Yang, Xiang Zhao, Zi Li, Wei Wang, Xiyan Li, Cuilin Xu,Lei Yang, Junfeng Guo, Min Wang, Yousong Peng, Yan Gao, Yuanji Guo, Leying Wen,Taijiao Jiang and Yuelong Shu. A comprehensivesurveillance of adamantane resistance among human influenza A virus isolatedfrom mainland China between 1956 and 2009. Antiver Ther, 2010;15(6):853-9.

92)     Hong Zhang#, Jinan Chen#, Yongqiang Wang#, Lin Peng, Xiaoxi Dong, Yi Lu, Amy E. Keating*, TaijiaoJiang*. A computationally guided protein screenuncovers coiled-coil interactions involved in vesicular transport. J Mol Biol, 2009 Sep 11; 392(1):228-41.

93)     Adeilton Brandao, Taijiao Jiang. Thecomposition of untranslated regions in Trypanosoma cruzi genes. Parasitology International, 2009 Sep; 58(3):215-9.

94)     Lili Zhao, Aiping Wu, Lijun Bi, Pei Liu, Xian-en Zhang, TaijiaoJiang, Gang Jin, Zhi Qi*. Length-dependent regulation of the Kv1.2channel activation by its C-terminus. Mol Membr Biol, 2009 Apr 01; 26(3):186-93.

95)    XiangjunDu#, Zhuo Wang#, Aiping Wu#,Lin Song, Yang Cao, Haiying Hang, and Taijiao Jiang*. Networks of genomic co-occurrence capturecharacteristics of human influenza A (H3N2) evolution. Genome Res, 2008 Jan 1; 18(1):178-87. 

96)    Andrew VMcDonnell, Taijiao Jiang, Amy E Keating* andBonnie Berger*. Paircoil2: Improved Prediction of Coiled Coils fromSequence. Bioinformatics, 22(2006), 356-358.

97)    Taijiao Jiang, Amy E Keating*. AVID: An integrative framework for discoveringfunctional relationships among proteins. BMC Bioinformatics, 6(2005), 136-148.

98)    Taijiao Jiang, Sidney Altman*. A protein subunit of human RNase P, Rpp14, and itsinteracting partner, OIP2, have 3'-->5' exoribonuclease activity. Proceedings of the National Academy ofSciences U.S.A. (PNAS), 99(2002), 5295-5300.

99)    Taijiao Jiang, Sidney Altman*. Protein-protein interactions with subunits ofhuman nuclear RNase P. Proceedings ofthe National Academy of Sciences U.S.A. (PNAS), 98(2001), 920-925.

100) TaijiaoJiang,Guerrier-Takada, Cecellia, Sidney Altman. Protein-RNA interactions in the subunits of humannuclear RNase P. RNA, 7(2001), 937-941.